Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Smarce1O54941 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarce1O54941 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarce1O54941 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarce1O54941 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Smarce1O54941 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC17.15■□□□□ 0.34
Smarce1O54941 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Smarce1O54941 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Gm16198-201ENSMUST00000118766 670 ntBASIC17.15■□□□□ 0.34
Smarce1O54941 Gm13597-201ENSMUST00000121239 375 ntBASIC17.15■□□□□ 0.34
Smarce1O54941 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.15■□□□□ 0.34
Smarce1O54941 Gm45098-201ENSMUST00000207179 657 ntBASIC17.15■□□□□ 0.34
Smarce1O54941 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Smarce1O54941 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarce1O54941 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Smarce1O54941 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Smarce1O54941 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarce1O54941 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarce1O54941 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Smarce1O54941 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smarce1O54941 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarce1O54941 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Smarce1O54941 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarce1O54941 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Smarce1O54941 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.14■□□□□ 0.33
Smarce1O54941 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Smarce1O54941 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.14■□□□□ 0.33
Smarce1O54941 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.14■□□□□ 0.33
Smarce1O54941 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarce1O54941 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
Smarce1O54941 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarce1O54941 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarce1O54941 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarce1O54941 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarce1O54941 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarce1O54941 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Smarce1O54941 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarce1O54941 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarce1O54941 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Smarce1O54941 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Smarce1O54941 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarce1O54941 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Smarce1O54941 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarce1O54941 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Smarce1O54941 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarce1O54941 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarce1O54941 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarce1O54941 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarce1O54941 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarce1O54941 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarce1O54941 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarce1O54941 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Smarce1O54941 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Smarce1O54941 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarce1O54941 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarce1O54941 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Smarce1O54941 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarce1O54941 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarce1O54941 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.13■□□□□ 0.33
Smarce1O54941 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.13■□□□□ 0.33
Smarce1O54941 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.13■□□□□ 0.33
Smarce1O54941 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarce1O54941 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarce1O54941 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarce1O54941 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarce1O54941 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarce1O54941 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Smarce1O54941 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.13■□□□□ 0.33
Smarce1O54941 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smarce1O54941 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarce1O54941 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarce1O54941 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Smarce1O54941 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarce1O54941 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarce1O54941 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC17.13■□□□□ 0.33
Smarce1O54941 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smarce1O54941 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.13■□□□□ 0.33
Smarce1O54941 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarce1O54941 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 153.6 ms