Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Slc1a6O35544 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc1a6O35544 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc1a6O35544 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc1a6O35544 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Slc1a6O35544 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc1a6O35544 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc1a6O35544 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc1a6O35544 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc1a6O35544 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc1a6O35544 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc1a6O35544 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc1a6O35544 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.22□□□□□ -0.13
Slc1a6O35544 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc1a6O35544 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Slc1a6O35544 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc1a6O35544 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Slc1a6O35544 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.22□□□□□ -0.13
Slc1a6O35544 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc1a6O35544 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Slc1a6O35544 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc1a6O35544 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Slc1a6O35544 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Slc1a6O35544 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.22□□□□□ -0.13
Slc1a6O35544 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc1a6O35544 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Slc1a6O35544 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Slc1a6O35544 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.22□□□□□ -0.13
Slc1a6O35544 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc1a6O35544 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.22□□□□□ -0.13
Slc1a6O35544 Gm7230-201ENSMUST00000173026 815 ntBASIC14.22□□□□□ -0.13
Slc1a6O35544 Gm4899-201ENSMUST00000178708 719 ntBASIC14.22□□□□□ -0.13
Slc1a6O35544 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.22□□□□□ -0.13
Slc1a6O35544 Gm9182-201ENSMUST00000217829 639 ntBASIC14.22□□□□□ -0.13
Slc1a6O35544 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc1a6O35544 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc1a6O35544 Matn2-206ENSMUST00000228570 2798 ntBASIC14.22□□□□□ -0.13
Slc1a6O35544 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc1a6O35544 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc1a6O35544 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.22□□□□□ -0.13
Slc1a6O35544 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Slc1a6O35544 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc1a6O35544 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Slc1a6O35544 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc1a6O35544 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc1a6O35544 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc1a6O35544 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc1a6O35544 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc1a6O35544 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Slc1a6O35544 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc1a6O35544 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Slc1a6O35544 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.21□□□□□ -0.13
Slc1a6O35544 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc1a6O35544 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.21□□□□□ -0.13
Slc1a6O35544 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.21□□□□□ -0.13
Slc1a6O35544 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Slc1a6O35544 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc1a6O35544 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc1a6O35544 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.21□□□□□ -0.13
Slc1a6O35544 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.21□□□□□ -0.13
Slc1a6O35544 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Slc1a6O35544 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.21□□□□□ -0.13
Slc1a6O35544 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc1a6O35544 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc1a6O35544 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc1a6O35544 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.21□□□□□ -0.13
Slc1a6O35544 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc1a6O35544 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc1a6O35544 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc1a6O35544 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Slc1a6O35544 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc1a6O35544 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
Slc1a6O35544 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc1a6O35544 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc1a6O35544 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc1a6O35544 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Slc1a6O35544 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.2□□□□□ -0.14
Slc1a6O35544 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.2□□□□□ -0.14
Slc1a6O35544 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Slc1a6O35544 Gm8584-201ENSMUST00000171982 758 ntBASIC14.2□□□□□ -0.14
Slc1a6O35544 Gm6550-201ENSMUST00000187574 993 ntBASIC14.2□□□□□ -0.14
Slc1a6O35544 Gm2272-201ENSMUST00000194903 582 ntBASIC14.2□□□□□ -0.14
Slc1a6O35544 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms