Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Col15a1O35206 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col15a1O35206 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col15a1O35206 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col15a1O35206 AC159196.2-201ENSMUST00000224082 1622 ntBASIC18.3■□□□□ 0.52
Col15a1O35206 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Col15a1O35206 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col15a1O35206 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col15a1O35206 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col15a1O35206 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col15a1O35206 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col15a1O35206 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col15a1O35206 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC18.3■□□□□ 0.52
Col15a1O35206 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col15a1O35206 Gm8062-201ENSMUST00000139696 444 ntBASIC18.3■□□□□ 0.52
Col15a1O35206 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC18.3■□□□□ 0.52
Col15a1O35206 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col15a1O35206 Gm5276-201ENSMUST00000196683 1047 ntBASIC18.3■□□□□ 0.52
Col15a1O35206 Gm45841-201ENSMUST00000207700 164 ntBASIC18.3■□□□□ 0.52
Col15a1O35206 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col15a1O35206 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col15a1O35206 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col15a1O35206 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col15a1O35206 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col15a1O35206 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Col15a1O35206 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col15a1O35206 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col15a1O35206 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Col15a1O35206 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col15a1O35206 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col15a1O35206 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col15a1O35206 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col15a1O35206 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Col15a1O35206 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col15a1O35206 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC18.29■□□□□ 0.52
Col15a1O35206 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col15a1O35206 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col15a1O35206 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col15a1O35206 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col15a1O35206 Gm12416-201ENSMUST00000120911 1008 ntBASIC18.29■□□□□ 0.52
Col15a1O35206 Gm38230-201ENSMUST00000193572 1159 ntBASIC18.29■□□□□ 0.52
Col15a1O35206 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC18.29■□□□□ 0.52
Col15a1O35206 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC18.29■□□□□ 0.52
Col15a1O35206 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC18.29■□□□□ 0.52
Col15a1O35206 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC18.29■□□□□ 0.52
Col15a1O35206 AC114543.1-201ENSMUST00000226451 1558 ntBASIC18.29■□□□□ 0.52
Col15a1O35206 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col15a1O35206 Mir497b-201ENSMUST00000093601 125 ntBASIC18.29■□□□□ 0.52
Col15a1O35206 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Col15a1O35206 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col15a1O35206 Ssr1-204ENSMUST00000225319 1610 ntBASIC18.28■□□□□ 0.52
Col15a1O35206 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col15a1O35206 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col15a1O35206 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Col15a1O35206 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Col15a1O35206 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col15a1O35206 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col15a1O35206 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col15a1O35206 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col15a1O35206 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col15a1O35206 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col15a1O35206 Gm23931-201ENSMUST00000103842 109 ntBASIC18.28■□□□□ 0.52
Col15a1O35206 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
Col15a1O35206 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC18.28■□□□□ 0.52
Col15a1O35206 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col15a1O35206 Ighv1-51-201ENSMUST00000192903 354 ntBASIC18.28■□□□□ 0.52
Col15a1O35206 Gm42693-201ENSMUST00000196779 631 ntBASIC18.28■□□□□ 0.52
Col15a1O35206 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC18.28■□□□□ 0.52
Col15a1O35206 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col15a1O35206 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col15a1O35206 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col15a1O35206 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col15a1O35206 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col15a1O35206 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.27■□□□□ 0.52
Col15a1O35206 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col15a1O35206 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col15a1O35206 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col15a1O35206 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col15a1O35206 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col15a1O35206 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col15a1O35206 Efs-202ENSMUST00000227037 2540 ntBASIC18.27■□□□□ 0.52
Col15a1O35206 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col15a1O35206 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Col15a1O35206 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col15a1O35206 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col15a1O35206 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col15a1O35206 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Col15a1O35206 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC18.27■□□□□ 0.51
Col15a1O35206 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC18.27■□□□□ 0.51
Col15a1O35206 Gm38319-201ENSMUST00000194537 1266 ntBASIC18.27■□□□□ 0.51
Col15a1O35206 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC18.27■□□□□ 0.51
Col15a1O35206 AC155729.1-201ENSMUST00000227758 544 ntBASIC18.27■□□□□ 0.51
Col15a1O35206 AC122459.1-201ENSMUST00000228373 885 ntBASIC18.27■□□□□ 0.51
Col15a1O35206 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col15a1O35206 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC18.27■□□□□ 0.51
Col15a1O35206 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Col15a1O35206 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col15a1O35206 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col15a1O35206 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Col15a1O35206 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms