Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.57□□□□□ -0.24
Cx3cl1O35188 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cl1O35188 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm22065-201ENSMUST00000103753 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm22066-201ENSMUST00000103761 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm24932-201ENSMUST00000103763 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm24115-201ENSMUST00000103799 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm22190-201ENSMUST00000103827 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm22191-201ENSMUST00000103831 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm24721-201ENSMUST00000103849 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm28018-201ENSMUST00000103869 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm26399-201ENSMUST00000103937 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.57□□□□□ -0.24
Cx3cl1O35188 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm25349-201ENSMUST00000177728 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm23616-201ENSMUST00000177797 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm25871-201ENSMUST00000177816 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm24752-201ENSMUST00000178240 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm24496-201ENSMUST00000178287 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm25649-201ENSMUST00000178476 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm25548-201ENSMUST00000178681 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm23147-201ENSMUST00000178841 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm26095-201ENSMUST00000179270 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm22171-201ENSMUST00000179283 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm23936-201ENSMUST00000179354 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm22619-201ENSMUST00000179516 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm25255-201ENSMUST00000179579 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm24755-201ENSMUST00000179691 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm26506-201ENSMUST00000179692 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm25086-201ENSMUST00000179931 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm23243-201ENSMUST00000180047 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm24659-201ENSMUST00000180212 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm24169-201ENSMUST00000180244 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm23689-201ENSMUST00000180354 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm27359-201ENSMUST00000184153 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm27785-201ENSMUST00000184268 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm27466-201ENSMUST00000184396 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm27703-201ENSMUST00000184836 110 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.57□□□□□ -0.24
Cx3cl1O35188 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Cx3cl1O35188 Gm9182-201ENSMUST00000217829 639 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.57□□□□□ -0.24
Cx3cl1O35188 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cl1O35188 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cx3cl1O35188 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cx3cl1O35188 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cl1O35188 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cl1O35188 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cl1O35188 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cl1O35188 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cl1O35188 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.57□□□□□ -0.24
Cx3cl1O35188 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cx3cl1O35188 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cx3cl1O35188 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.56□□□□□ -0.24
Cx3cl1O35188 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cl1O35188 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cx3cl1O35188 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cx3cl1O35188 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.55□□□□□ -0.24
Cx3cl1O35188 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms