Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10553J3QPF1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Gm10553J3QPF1 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Gm10553J3QPF1 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Gm10553J3QPF1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm10553J3QPF1 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm10553J3QPF1 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Gm10553J3QPF1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm10553J3QPF1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Gm22175-201ENSMUST00000175007 78 ntBASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10553J3QPF1 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Gm10553J3QPF1 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Gm10553J3QPF1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10553J3QPF1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10553J3QPF1 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Gm10553J3QPF1 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10553J3QPF1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10553J3QPF1 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.01□□□□□ -0.65
Gm10553J3QPF1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.01□□□□□ -0.65
Gm10553J3QPF1 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10553J3QPF1 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10553J3QPF1 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.01□□□□□ -0.65
Gm10553J3QPF1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10553J3QPF1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms