Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3139J3QK78 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3139J3QK78 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Gm12882-201ENSMUST00000121696 517 ntBASIC14.37□□□□□ -0.11
Gm3139J3QK78 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Gm27989-201ENSMUST00000184721 107 ntBASIC14.37□□□□□ -0.11
Gm3139J3QK78 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Mir125a-201ENSMUST00000083545 68 ntBASIC14.37□□□□□ -0.11
Gm3139J3QK78 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3139J3QK78 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.36□□□□□ -0.11
Gm3139J3QK78 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 BC001981-202ENSMUST00000191393 1545 ntBASIC14.36□□□□□ -0.11
Gm3139J3QK78 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.36□□□□□ -0.11
Gm3139J3QK78 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.36□□□□□ -0.11
Gm3139J3QK78 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Gm14057-201ENSMUST00000120631 482 ntBASIC14.36□□□□□ -0.11
Gm3139J3QK78 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.36□□□□□ -0.11
Gm3139J3QK78 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Gm3139J3QK78 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3139J3QK78 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Mir8102-201ENSMUST00000184148 139 ntBASIC14.35□□□□□ -0.11
Gm3139J3QK78 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Gm9063-201ENSMUST00000223299 582 ntBASIC14.35□□□□□ -0.11
Gm3139J3QK78 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.35□□□□□ -0.11
Gm3139J3QK78 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms