Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Gm18959-201ENSMUST00000208954 655 ntBASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.84□□□□□ -0.03
Trim55G3X8Y1 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Trim55G3X8Y1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trim55G3X8Y1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.83□□□□□ -0.03
Trim55G3X8Y1 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim55G3X8Y1 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim55G3X8Y1 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim55G3X8Y1 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trim55G3X8Y1 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Gm27463-201ENSMUST00000183569 57 ntBASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim55G3X8Y1 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim55G3X8Y1 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms