Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Gm5279-201ENSMUST00000199575 745 ntBASIC17.3■□□□□ 0.36
NpcdF8VQB8 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Gm11814-201ENSMUST00000119515 929 ntBASIC17.29■□□□□ 0.36
NpcdF8VQB8 Gm27731-201ENSMUST00000185192 107 ntBASIC17.29■□□□□ 0.36
NpcdF8VQB8 Gm33320-201ENSMUST00000192232 530 ntBASIC17.29■□□□□ 0.36
NpcdF8VQB8 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.29■□□□□ 0.36
NpcdF8VQB8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
NpcdF8VQB8 Sybu-209ENSMUST00000228639 4113 ntBASIC17.28■□□□□ 0.36
NpcdF8VQB8 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NpcdF8VQB8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.28■□□□□ 0.36
NpcdF8VQB8 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Gm6916-202ENSMUST00000205523 195 ntBASIC17.28■□□□□ 0.36
NpcdF8VQB8 AC156560.2-201ENSMUST00000221232 264 ntBASIC17.28■□□□□ 0.36
NpcdF8VQB8 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NpcdF8VQB8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NpcdF8VQB8 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.28■□□□□ 0.36
NpcdF8VQB8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.28■□□□□ 0.36
NpcdF8VQB8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NpcdF8VQB8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NpcdF8VQB8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
NpcdF8VQB8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NpcdF8VQB8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NpcdF8VQB8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
NpcdF8VQB8 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NpcdF8VQB8 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.27■□□□□ 0.36
NpcdF8VQB8 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NpcdF8VQB8 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
NpcdF8VQB8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NpcdF8VQB8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NpcdF8VQB8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NpcdF8VQB8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NpcdF8VQB8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
NpcdF8VQB8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms