Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Colca2F8VPY8 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Colca2F8VPY8 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Colca2F8VPY8 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Colca2F8VPY8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Colca2F8VPY8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Colca2F8VPY8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Colca2F8VPY8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Colca2F8VPY8 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Colca2F8VPY8 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Colca2F8VPY8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Colca2F8VPY8 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Colca2F8VPY8 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Colca2F8VPY8 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Colca2F8VPY8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Colca2F8VPY8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Colca2F8VPY8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Colca2F8VPY8 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Colca2F8VPY8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.53□□□□□ -0.24
Colca2F8VPY8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Colca2F8VPY8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Colca2F8VPY8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Colca2F8VPY8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Colca2F8VPY8 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Colca2F8VPY8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Colca2F8VPY8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.52□□□□□ -0.24
Colca2F8VPY8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Colca2F8VPY8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Colca2F8VPY8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Colca2F8VPY8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Colca2F8VPY8 Gm14723-201ENSMUST00000118686 215 ntBASIC13.52□□□□□ -0.25
Colca2F8VPY8 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Colca2F8VPY8 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Colca2F8VPY8 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Colca2F8VPY8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Colca2F8VPY8 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.52□□□□□ -0.25
Colca2F8VPY8 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.52□□□□□ -0.25
Colca2F8VPY8 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.52□□□□□ -0.25
Colca2F8VPY8 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.52□□□□□ -0.25
Colca2F8VPY8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Colca2F8VPY8 Gm19309-201ENSMUST00000218295 205 ntBASIC13.52□□□□□ -0.25
Colca2F8VPY8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.52□□□□□ -0.25
Colca2F8VPY8 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.52□□□□□ -0.25
Colca2F8VPY8 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Colca2F8VPY8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Colca2F8VPY8 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Colca2F8VPY8 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Colca2F8VPY8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Colca2F8VPY8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Colca2F8VPY8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Colca2F8VPY8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Colca2F8VPY8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Colca2F8VPY8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.51□□□□□ -0.25
Colca2F8VPY8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.51□□□□□ -0.25
Colca2F8VPY8 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Mir3102-201ENSMUST00000175555 104 ntBASIC13.51□□□□□ -0.25
Colca2F8VPY8 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Colca2F8VPY8 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.5□□□□□ -0.25
Colca2F8VPY8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.5□□□□□ -0.25
Colca2F8VPY8 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.5□□□□□ -0.25
Colca2F8VPY8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Colca2F8VPY8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.5□□□□□ -0.25
Colca2F8VPY8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms