Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh1F7BJK1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Gm7230-201ENSMUST00000173026 815 ntBASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Gm28659-201ENSMUST00000188013 759 ntBASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdh1F7BJK1 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh1F7BJK1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms