Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Gm5566-201ENSMUST00000116118 459 ntBASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Gm5866-201ENSMUST00000177881 973 ntBASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Gm45098-201ENSMUST00000207179 657 ntBASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Gm44344-201ENSMUST00000200287 129 ntBASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.43□□□□□ -0.26
Pcdh17E9PXF0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Gm24543-201ENSMUST00000103867 82 ntBASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Gm23547-201ENSMUST00000158210 271 ntBASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Gm2451-201ENSMUST00000199447 999 ntBASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Gm10290-201ENSMUST00000200451 999 ntBASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Gm7775-201ENSMUST00000218871 853 ntBASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh17E9PXF0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh17E9PXF0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh17E9PXF0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh17E9PXF0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pcdh17E9PXF0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms