Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.21□□□□□ -0.13
Srp54bE9PXC0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Srp54bE9PXC0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Srp54bE9PXC0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.21□□□□□ -0.13
Srp54bE9PXC0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Srp54bE9PXC0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Srp54bE9PXC0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Srp54bE9PXC0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Srp54bE9PXC0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Srp54bE9PXC0 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Srp54bE9PXC0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Srp54bE9PXC0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Srp54bE9PXC0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.2□□□□□ -0.14
Srp54bE9PXC0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Gm20445-201ENSMUST00000061905 565 ntBASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54bE9PXC0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Gm6218-201ENSMUST00000219812 628 ntBASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54bE9PXC0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.18□□□□□ -0.14
Srp54bE9PXC0 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms