Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Gm15371-201ENSMUST00000117057 784 ntBASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Gm21470-201ENSMUST00000187680 696 ntBASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Gm18730-201ENSMUST00000218038 343 ntBASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Gm9211-201ENSMUST00000182882 975 ntBASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Gm6771-201ENSMUST00000182716 1001 ntBASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Gm8325-201ENSMUST00000099086 453 ntBASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Col6a3E9PWQ3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Gm28450-201ENSMUST00000187349 638 ntBASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Gm25880-201ENSMUST00000104331 132 ntBASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Gm38317-201ENSMUST00000195564 343 ntBASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a3E9PWQ3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Gm12485-201ENSMUST00000119641 291 ntBASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Gm11591-201ENSMUST00000120063 702 ntBASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Gm19459-201ENSMUST00000176240 835 ntBASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Gm10268-201ENSMUST00000085340 555 ntBASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.09□□□□□ -0.15
Col6a3E9PWQ3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms