Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Col4a6B1AVK5 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col4a6B1AVK5 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col4a6B1AVK5 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col4a6B1AVK5 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Col4a6B1AVK5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col4a6B1AVK5 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Col4a6B1AVK5 Gm8213-201ENSMUST00000118191 441 ntBASIC14.56□□□□□ -0.08
Col4a6B1AVK5 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.56□□□□□ -0.08
Col4a6B1AVK5 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col4a6B1AVK5 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.56□□□□□ -0.08
Col4a6B1AVK5 Gm4271-201ENSMUST00000174444 973 ntBASIC14.56□□□□□ -0.08
Col4a6B1AVK5 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.56□□□□□ -0.08
Col4a6B1AVK5 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col4a6B1AVK5 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col4a6B1AVK5 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col4a6B1AVK5 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col4a6B1AVK5 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col4a6B1AVK5 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col4a6B1AVK5 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col4a6B1AVK5 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col4a6B1AVK5 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.56□□□□□ -0.08
Col4a6B1AVK5 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.56□□□□□ -0.08
Col4a6B1AVK5 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Gm6013-201ENSMUST00000212264 699 ntBASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.55□□□□□ -0.08
Col4a6B1AVK5 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.55□□□□□ -0.08
Col4a6B1AVK5 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col4a6B1AVK5 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col4a6B1AVK5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col4a6B1AVK5 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col4a6B1AVK5 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col4a6B1AVK5 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col4a6B1AVK5 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col4a6B1AVK5 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col4a6B1AVK5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col4a6B1AVK5 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.54□□□□□ -0.08
Col4a6B1AVK5 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col4a6B1AVK5 Gm12384-201ENSMUST00000119228 919 ntBASIC14.54□□□□□ -0.08
Col4a6B1AVK5 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col4a6B1AVK5 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col4a6B1AVK5 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.54□□□□□ -0.08
Col4a6B1AVK5 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.54□□□□□ -0.08
Col4a6B1AVK5 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.54□□□□□ -0.08
Col4a6B1AVK5 Gm29705-201ENSMUST00000212598 474 ntBASIC14.54□□□□□ -0.08
Col4a6B1AVK5 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col4a6B1AVK5 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col4a6B1AVK5 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col4a6B1AVK5 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col4a6B1AVK5 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.54□□□□□ -0.08
Col4a6B1AVK5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col4a6B1AVK5 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Gm27682-201ENSMUST00000183930 110 ntBASIC14.53□□□□□ -0.08
Col4a6B1AVK5 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms