Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.12□□□□□ -0.15
Chd3B1AR17 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chd3B1AR17 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chd3B1AR17 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.12□□□□□ -0.15
Chd3B1AR17 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.12□□□□□ -0.15
Chd3B1AR17 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd3B1AR17 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Chd3B1AR17 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd3B1AR17 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.12□□□□□ -0.15
Chd3B1AR17 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.12□□□□□ -0.15
Chd3B1AR17 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.12□□□□□ -0.15
Chd3B1AR17 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd3B1AR17 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd3B1AR17 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd3B1AR17 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd3B1AR17 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd3B1AR17 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd3B1AR17 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd3B1AR17 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chd3B1AR17 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chd3B1AR17 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chd3B1AR17 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd3B1AR17 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd3B1AR17 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.11□□□□□ -0.15
Chd3B1AR17 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Chd3B1AR17 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Chd3B1AR17 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Chd3B1AR17 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd3B1AR17 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd3B1AR17 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.11□□□□□ -0.15
Chd3B1AR17 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd3B1AR17 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd3B1AR17 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.11□□□□□ -0.15
Chd3B1AR17 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd3B1AR17 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd3B1AR17 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd3B1AR17 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd3B1AR17 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd3B1AR17 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Chd3B1AR17 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Chd3B1AR17 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Chd3B1AR17 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.11□□□□□ -0.15
Chd3B1AR17 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Chd3B1AR17 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Chd3B1AR17 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd3B1AR17 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd3B1AR17 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Chd3B1AR17 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd3B1AR17 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Chd3B1AR17 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Chd3B1AR17 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Chd3B1AR17 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.1□□□□□ -0.15
Chd3B1AR17 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd3B1AR17 Gm9522-201ENSMUST00000182394 926 ntBASIC14.1□□□□□ -0.15
Chd3B1AR17 Gm45453-201ENSMUST00000211758 853 ntBASIC14.1□□□□□ -0.15
Chd3B1AR17 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Chd3B1AR17 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.1□□□□□ -0.15
Chd3B1AR17 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd3B1AR17 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd3B1AR17 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd3B1AR17 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Chd3B1AR17 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chd3B1AR17 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.1□□□□□ -0.15
Chd3B1AR17 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd3B1AR17 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd3B1AR17 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Chd3B1AR17 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chd3B1AR17 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd3B1AR17 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd3B1AR17 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd3B1AR17 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd3B1AR17 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd3B1AR17 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd3B1AR17 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Chd3B1AR17 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.1□□□□□ -0.15
Chd3B1AR17 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd3B1AR17 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Chd3B1AR17 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Chd3B1AR17 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd3B1AR17 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd3B1AR17 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd3B1AR17 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd3B1AR17 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd3B1AR17 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chd3B1AR17 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd3B1AR17 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chd3B1AR17 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd3B1AR17 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd3B1AR17 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd3B1AR17 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.09□□□□□ -0.15
Chd3B1AR17 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd3B1AR17 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.09□□□□□ -0.15
Chd3B1AR17 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Chd3B1AR17 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd3B1AR17 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd3B1AR17 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chd3B1AR17 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Chd3B1AR17 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd3B1AR17 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Chd3B1AR17 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms