Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-1A0N8R1 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Gm11452-201ENSMUST00000122376 690 ntBASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Mir8098-201ENSMUST00000184011 137 ntBASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12-1A0N8R1 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms