Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 Gm45098-201ENSMUST00000207179 657 ntBASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc112A0AUP1 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Gm27301-201ENSMUST00000184012 127 ntBASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.48■□□□□ 0.23
Ccdc112A0AUP1 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Ccdc112A0AUP1 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Gm2651-201ENSMUST00000203560 838 ntBASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc112A0AUP1 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms