Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Nespas-201ENSMUST00000143738 1083 ntBASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm18958-201ENSMUST00000174258 762 ntBASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm36967-201ENSMUST00000193814 266 ntBASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm40848-201ENSMUST00000221998 324 ntBASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm9924-202ENSMUST00000192760 2311 ntBASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Gm3880A0A1B0GSB3 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm43321-201ENSMUST00000198897 2409 ntBASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm42778-201ENSMUST00000199644 553 ntBASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Golgb1-201ENSMUST00000023534 498 ntBASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm9988-201ENSMUST00000069786 435 ntBASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm27194-201ENSMUST00000175753 2936 ntBASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms