Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.25■□□□□ 0.35
Cfap99A0A140LIX9 Gm9063-201ENSMUST00000223299 582 ntBASIC17.25■□□□□ 0.35
Cfap99A0A140LIX9 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cfap99A0A140LIX9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap99A0A140LIX9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap99A0A140LIX9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap99A0A140LIX9 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap99A0A140LIX9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap99A0A140LIX9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Cfap99A0A140LIX9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap99A0A140LIX9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap99A0A140LIX9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cfap99A0A140LIX9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap99A0A140LIX9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap99A0A140LIX9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.25■□□□□ 0.35
Cfap99A0A140LIX9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap99A0A140LIX9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Cfap99A0A140LIX9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap99A0A140LIX9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Gm7488-201ENSMUST00000117148 684 ntBASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap99A0A140LIX9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap99A0A140LIX9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Gm14719-201ENSMUST00000121891 340 ntBASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Gm16215-201ENSMUST00000161990 637 ntBASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap99A0A140LIX9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms