Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm12895-201ENSMUST00000122214 226 ntBASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm4535-201ENSMUST00000182274 558 ntBASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm10355-201ENSMUST00000097146 517 ntBASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6d-5A0A075B6B9 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6d-5A0A075B6B9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.65□□□□□ -0.55
Trav6d-5A0A075B6B9 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6d-5A0A075B6B9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6d-5A0A075B6B9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6d-5A0A075B6B9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm25925-201ENSMUST00000158314 306 ntBASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Mir6982-201ENSMUST00000184354 68 ntBASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm7787-201ENSMUST00000216858 688 ntBASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-5A0A075B6B9 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm27357-201ENSMUST00000183754 135 ntBASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm9182-201ENSMUST00000217829 639 ntBASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms