Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm37500-201ENSMUST00000192059 1443 ntBASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm44065-201ENSMUST00000203184 3527 ntBASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm13418-201ENSMUST00000119097 944 ntBASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm7230-201ENSMUST00000173026 815 ntBASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm6089-201ENSMUST00000197666 938 ntBASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm42632-201ENSMUST00000201707 2411 ntBASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm3928-201ENSMUST00000121141 1307 ntBASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav6n-6A0A075B6B2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav6n-6A0A075B6B2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trav6n-6A0A075B6B2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav6n-6A0A075B6B2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav6n-6A0A075B6B2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav6n-6A0A075B6B2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav6n-6A0A075B6B2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.78□□□□□ -0.68
Trav6n-6A0A075B6B2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav6n-6A0A075B6B2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav6n-6A0A075B6B2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav6n-6A0A075B6B2 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav6n-6A0A075B6B2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav6n-6A0A075B6B2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav6n-6A0A075B6B2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav6n-6A0A075B6B2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav6n-6A0A075B6B2 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav6n-6A0A075B6B2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Trav6n-6A0A075B6B2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms