Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb2S4R1M3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.46□□□□□ -0.09
H2afb2S4R1M3 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Gm45612-201ENSMUST00000211320 160 ntBASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb2S4R1M3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb2S4R1M3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb2S4R1M3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
H2afb2S4R1M3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb2S4R1M3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb2S4R1M3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.1
H2afb2S4R1M3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.46□□□□□ -0.1
H2afb2S4R1M3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb2S4R1M3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb2S4R1M3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb2S4R1M3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.46□□□□□ -0.1
H2afb2S4R1M3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb2S4R1M3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Gm18057-201ENSMUST00000208220 503 ntBASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms