Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.74□□□□□ -0.21
Lhx9Q9WUH2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx9Q9WUH2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Lhx9Q9WUH2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx9Q9WUH2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx9Q9WUH2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx9Q9WUH2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx9Q9WUH2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx9Q9WUH2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx9Q9WUH2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx9Q9WUH2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx9Q9WUH2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Lhx9Q9WUH2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx9Q9WUH2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx9Q9WUH2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.74□□□□□ -0.21
Lhx9Q9WUH2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx9Q9WUH2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.74□□□□□ -0.21
Lhx9Q9WUH2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx9Q9WUH2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx9Q9WUH2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx9Q9WUH2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.74□□□□□ -0.21
Lhx9Q9WUH2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Gm9182-201ENSMUST00000217829 639 ntBASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx9Q9WUH2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx9Q9WUH2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Lhx9Q9WUH2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx9Q9WUH2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx9Q9WUH2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx9Q9WUH2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx9Q9WUH2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.71□□□□□ -0.21
Lhx9Q9WUH2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx9Q9WUH2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx9Q9WUH2 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lhx9Q9WUH2 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms