Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn11aQ9R053 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Scn11aQ9R053 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Gm37424-201ENSMUST00000191727 561 ntBASIC16.87■□□□□ 0.29
Scn11aQ9R053 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn11aQ9R053 AC159747.1-201ENSMUST00000219903 265 ntBASIC16.87■□□□□ 0.29
Scn11aQ9R053 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Gm13689-201ENSMUST00000119360 685 ntBASIC16.87■□□□□ 0.29
Scn11aQ9R053 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.87■□□□□ 0.29
Scn11aQ9R053 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn11aQ9R053 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC16.87■□□□□ 0.29
Scn11aQ9R053 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC16.87■□□□□ 0.29
Scn11aQ9R053 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn11aQ9R053 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn11aQ9R053 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn11aQ9R053 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn11aQ9R053 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn11aQ9R053 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn11aQ9R053 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Scn11aQ9R053 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn11aQ9R053 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.86■□□□□ 0.29
Scn11aQ9R053 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Scn11aQ9R053 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Scn11aQ9R053 Gm12485-201ENSMUST00000119641 291 ntBASIC16.86■□□□□ 0.29
Scn11aQ9R053 Gm27892-201ENSMUST00000185017 106 ntBASIC16.86■□□□□ 0.29
Scn11aQ9R053 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.86■□□□□ 0.29
Scn11aQ9R053 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn11aQ9R053 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.86■□□□□ 0.29
Scn11aQ9R053 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scn11aQ9R053 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scn11aQ9R053 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Scn11aQ9R053 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn11aQ9R053 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn11aQ9R053 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scn11aQ9R053 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.86■□□□□ 0.29
Scn11aQ9R053 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn11aQ9R053 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn11aQ9R053 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Scn11aQ9R053 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Gm12329-201ENSMUST00000120829 1007 ntBASIC16.85■□□□□ 0.29
Scn11aQ9R053 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn11aQ9R053 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn11aQ9R053 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn11aQ9R053 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.84■□□□□ 0.29
Scn11aQ9R053 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.84■□□□□ 0.29
Scn11aQ9R053 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Scn11aQ9R053 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn11aQ9R053 Gm18307-201ENSMUST00000206864 949 ntBASIC16.84■□□□□ 0.29
Scn11aQ9R053 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn11aQ9R053 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn11aQ9R053 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn11aQ9R053 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn11aQ9R053 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn11aQ9R053 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.84■□□□□ 0.29
Scn11aQ9R053 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn11aQ9R053 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn11aQ9R053 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn11aQ9R053 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms