Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
OtofQ9ESF1 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
OtofQ9ESF1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
OtofQ9ESF1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
OtofQ9ESF1 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
OtofQ9ESF1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
OtofQ9ESF1 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
OtofQ9ESF1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
OtofQ9ESF1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
OtofQ9ESF1 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.24□□□□□ -0.13
OtofQ9ESF1 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.23□□□□□ -0.13
OtofQ9ESF1 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
OtofQ9ESF1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Gm11918-201ENSMUST00000121660 179 ntBASIC14.23□□□□□ -0.13
OtofQ9ESF1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Gm5354-201ENSMUST00000182417 973 ntBASIC14.23□□□□□ -0.13
OtofQ9ESF1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OtofQ9ESF1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OtofQ9ESF1 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
OtofQ9ESF1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OtofQ9ESF1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
OtofQ9ESF1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OtofQ9ESF1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.22□□□□□ -0.13
OtofQ9ESF1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
OtofQ9ESF1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
OtofQ9ESF1 Gm12341-201ENSMUST00000119724 503 ntBASIC14.22□□□□□ -0.13
OtofQ9ESF1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
OtofQ9ESF1 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OtofQ9ESF1 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.22□□□□□ -0.13
OtofQ9ESF1 Gm5425-201ENSMUST00000214125 459 ntBASIC14.22□□□□□ -0.13
OtofQ9ESF1 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.22□□□□□ -0.13
OtofQ9ESF1 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.22□□□□□ -0.13
OtofQ9ESF1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
OtofQ9ESF1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
OtofQ9ESF1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
OtofQ9ESF1 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
OtofQ9ESF1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
OtofQ9ESF1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OtofQ9ESF1 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
OtofQ9ESF1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
OtofQ9ESF1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.22□□□□□ -0.13
OtofQ9ESF1 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OtofQ9ESF1 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
OtofQ9ESF1 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.22□□□□□ -0.13
OtofQ9ESF1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
OtofQ9ESF1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
OtofQ9ESF1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.22□□□□□ -0.13
OtofQ9ESF1 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.22□□□□□ -0.13
OtofQ9ESF1 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.22□□□□□ -0.13
OtofQ9ESF1 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.22□□□□□ -0.13
OtofQ9ESF1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
OtofQ9ESF1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
OtofQ9ESF1 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.21□□□□□ -0.13
OtofQ9ESF1 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
OtofQ9ESF1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
OtofQ9ESF1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
OtofQ9ESF1 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
OtofQ9ESF1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
OtofQ9ESF1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms