Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tubb3Q9ERD7 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Gm45612-201ENSMUST00000211320 160 ntBASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tubb3Q9ERD7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Tubb3Q9ERD7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.34□□□□□ -0.11
Tubb3Q9ERD7 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms