Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Nkx2-4Q9EQM3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-4Q9EQM3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-4Q9EQM3 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-4Q9EQM3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.73□□□□□ -0.05
Nkx2-4Q9EQM3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-4Q9EQM3 Gm5425-201ENSMUST00000214125 459 ntBASIC14.73□□□□□ -0.05
Nkx2-4Q9EQM3 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-4Q9EQM3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-4Q9EQM3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Nkx2-4Q9EQM3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-4Q9EQM3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-4Q9EQM3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-4Q9EQM3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Nkx2-4Q9EQM3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-4Q9EQM3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-4Q9EQM3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Nkx2-4Q9EQM3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-4Q9EQM3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-4Q9EQM3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-4Q9EQM3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-4Q9EQM3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Gm10275-202ENSMUST00000168697 495 ntBASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Gm10275-201ENSMUST00000092620 635 ntBASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-4Q9EQM3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Gm23931-201ENSMUST00000103842 109 ntBASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Gm6013-201ENSMUST00000212264 699 ntBASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-4Q9EQM3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nkx2-4Q9EQM3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nkx2-4Q9EQM3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nkx2-4Q9EQM3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms