Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Gm12138-201ENSMUST00000122180 951 ntBASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Ighv1-51-201ENSMUST00000192903 354 ntBASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Ighv5-13-201ENSMUST00000193550 290 ntBASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Gm15163-201ENSMUST00000120749 1302 ntBASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf1Q9EPU4 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 Gm13385-201ENSMUST00000121089 220 ntBASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 Gm23984-201ENSMUST00000157139 203 ntBASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 Gm2445-201ENSMUST00000182798 989 ntBASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 Gm37917-201ENSMUST00000194711 392 ntBASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 Gm42471-201ENSMUST00000201457 1865 ntBASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf1Q9EPU4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
Cpsf1Q9EPU4 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf1Q9EPU4 Gm43205-201ENSMUST00000198622 1968 ntBASIC19.7■□□□□ 0.74
Cpsf1Q9EPU4 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Cpsf1Q9EPU4 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf1Q9EPU4 Gm6745-201ENSMUST00000199216 526 ntBASIC19.7■□□□□ 0.74
Cpsf1Q9EPU4 AC238811.3-201ENSMUST00000225422 709 ntBASIC19.7■□□□□ 0.74
Cpsf1Q9EPU4 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf1Q9EPU4 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf1Q9EPU4 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf1Q9EPU4 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf1Q9EPU4 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf1Q9EPU4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf1Q9EPU4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf1Q9EPU4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cpsf1Q9EPU4 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf1Q9EPU4 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf1Q9EPU4 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf1Q9EPU4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cpsf1Q9EPU4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cpsf1Q9EPU4 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf1Q9EPU4 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf1Q9EPU4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cpsf1Q9EPU4 Gm5279-201ENSMUST00000199575 745 ntBASIC19.69■□□□□ 0.74
Cpsf1Q9EPU4 AC165157.4-201ENSMUST00000220587 139 ntBASIC19.69■□□□□ 0.74
Cpsf1Q9EPU4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC19.69■□□□□ 0.74
Cpsf1Q9EPU4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf1Q9EPU4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf1Q9EPU4 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf1Q9EPU4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cpsf1Q9EPU4 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Cpsf1Q9EPU4 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf1Q9EPU4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf1Q9EPU4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms