Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Gm11543-201ENSMUST00000120758 370 ntBASIC13.42□□□□□ -0.26
Cdc40Q9DC48 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.42□□□□□ -0.26
Cdc40Q9DC48 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cdc40Q9DC48 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Gm6973-201ENSMUST00000117080 721 ntBASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Gm20949-201ENSMUST00000206478 952 ntBASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdc40Q9DC48 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms