Protein–RNA interactions for Protein: Q9D4V4

Taf1d, TATA box-binding protein-associated factor RNA polymerase I subunit D, mousemouse

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1dQ9D4V4 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Taf1dQ9D4V4 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Taf1dQ9D4V4 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.09■□□□□ 0.33
Taf1dQ9D4V4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.09■□□□□ 0.33
Taf1dQ9D4V4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Taf1dQ9D4V4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Taf1dQ9D4V4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Taf1dQ9D4V4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Taf1dQ9D4V4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Taf1dQ9D4V4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Taf1dQ9D4V4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Taf1dQ9D4V4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Taf1dQ9D4V4 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Gm11793-201ENSMUST00000120433 981 ntBASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 AC155637.1-201ENSMUST00000218560 636 ntBASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Taf1dQ9D4V4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 Gm38000-201ENSMUST00000192390 1215 ntBASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 Gm7118-201ENSMUST00000200167 1003 ntBASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 AC139350.3-201ENSMUST00000226151 420 ntBASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Taf1dQ9D4V4 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Gm37015-201ENSMUST00000192763 1521 ntBASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Gm43133-201ENSMUST00000197472 463 ntBASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Olfr284-202ENSMUST00000206647 966 ntBASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Gm18027-201ENSMUST00000218947 619 ntBASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Taf1dQ9D4V4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Taf1dQ9D4V4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Taf1dQ9D4V4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Taf1dQ9D4V4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Taf1dQ9D4V4 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Taf1dQ9D4V4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Taf1dQ9D4V4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Taf1dQ9D4V4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms