Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssr1Q9CY50 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssr1Q9CY50 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ssr1Q9CY50 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssr1Q9CY50 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssr1Q9CY50 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ssr1Q9CY50 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssr1Q9CY50 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssr1Q9CY50 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ssr1Q9CY50 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssr1Q9CY50 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssr1Q9CY50 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.71■□□□□ 0.11
Ssr1Q9CY50 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ssr1Q9CY50 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssr1Q9CY50 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ssr1Q9CY50 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.71■□□□□ 0.11
Ssr1Q9CY50 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssr1Q9CY50 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssr1Q9CY50 Gm15590-201ENSMUST00000078419 552 ntBASIC15.71■□□□□ 0.11
Ssr1Q9CY50 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssr1Q9CY50 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ssr1Q9CY50 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssr1Q9CY50 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssr1Q9CY50 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ssr1Q9CY50 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
Ssr1Q9CY50 Gm45053-201ENSMUST00000206112 2499 ntBASIC15.71■□□□□ 0.1
Ssr1Q9CY50 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ssr1Q9CY50 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ssr1Q9CY50 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Ssr1Q9CY50 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.7■□□□□ 0.1
Ssr1Q9CY50 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Ssr1Q9CY50 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Gm13036-201ENSMUST00000117799 748 ntBASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms