Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn1Q9CWM4 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Mir6404-201ENSMUST00000183699 94 ntBASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pfdn1Q9CWM4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Gm42569-201ENSMUST00000200539 472 ntBASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn1Q9CWM4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn1Q9CWM4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms