Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smc3Q9CW03 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc3Q9CW03 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc3Q9CW03 Gm16198-201ENSMUST00000118766 670 ntBASIC17.01■□□□□ 0.31
Smc3Q9CW03 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.01■□□□□ 0.31
Smc3Q9CW03 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc3Q9CW03 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.01■□□□□ 0.31
Smc3Q9CW03 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.01■□□□□ 0.31
Smc3Q9CW03 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smc3Q9CW03 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc3Q9CW03 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.01■□□□□ 0.31
Smc3Q9CW03 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.01■□□□□ 0.31
Smc3Q9CW03 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smc3Q9CW03 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc3Q9CW03 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc3Q9CW03 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.01■□□□□ 0.31
Smc3Q9CW03 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc3Q9CW03 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc3Q9CW03 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc3Q9CW03 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc3Q9CW03 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc3Q9CW03 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Smc3Q9CW03 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Smc3Q9CW03 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Smc3Q9CW03 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 Gm14042-201ENSMUST00000120139 833 ntBASIC17■□□□□ 0.31
Smc3Q9CW03 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17■□□□□ 0.31
Smc3Q9CW03 Gm12350-201ENSMUST00000121208 462 ntBASIC17■□□□□ 0.31
Smc3Q9CW03 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17■□□□□ 0.31
Smc3Q9CW03 AC164629.2-201ENSMUST00000217916 270 ntBASIC17■□□□□ 0.31
Smc3Q9CW03 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17■□□□□ 0.31
Smc3Q9CW03 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Smc3Q9CW03 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17■□□□□ 0.31
Smc3Q9CW03 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smc3Q9CW03 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.99■□□□□ 0.31
Smc3Q9CW03 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.99■□□□□ 0.31
Smc3Q9CW03 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc3Q9CW03 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Smc3Q9CW03 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Smc3Q9CW03 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Smc3Q9CW03 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc3Q9CW03 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc3Q9CW03 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.98■□□□□ 0.31
Smc3Q9CW03 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.98■□□□□ 0.31
Smc3Q9CW03 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc3Q9CW03 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.98■□□□□ 0.31
Smc3Q9CW03 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc3Q9CW03 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc3Q9CW03 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc3Q9CW03 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc3Q9CW03 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms