Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
H2afb1Q9CQ70 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
H2afb1Q9CQ70 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.83□□□□□ -0.51
H2afb1Q9CQ70 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Gm45747-201ENSMUST00000212203 999 ntBASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Psmb5-202ENSMUST00000227257 622 ntBASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Mzt1-203ENSMUST00000227948 952 ntBASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb1Q9CQ70 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb1Q9CQ70 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms