Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim34aQ99PP6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim34aQ99PP6 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim34aQ99PP6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim34aQ99PP6 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.77■□□□□ 0.43
Trim34aQ99PP6 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim34aQ99PP6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 Gm37748-201ENSMUST00000194379 1140 ntBASIC17.76■□□□□ 0.43
Trim34aQ99PP6 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.76■□□□□ 0.43
Trim34aQ99PP6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Gm15957-201ENSMUST00000118893 974 ntBASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim34aQ99PP6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Gm5354-201ENSMUST00000182417 973 ntBASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Gm8602-201ENSMUST00000184045 607 ntBASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Gm21470-201ENSMUST00000187680 696 ntBASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Gm25857-201ENSMUST00000082788 129 ntBASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms