Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh15Q99PJ1 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh15Q99PJ1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh15Q99PJ1 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdh15Q99PJ1 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh15Q99PJ1 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC16.01■□□□□ 0.15
Pcdh15Q99PJ1 Gm9368-201ENSMUST00000219348 831 ntBASIC16.01■□□□□ 0.15
Pcdh15Q99PJ1 Gm4935-201ENSMUST00000221316 1198 ntBASIC16.01■□□□□ 0.15
Pcdh15Q99PJ1 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh15Q99PJ1 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh15Q99PJ1 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pcdh15Q99PJ1 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh15Q99PJ1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh15Q99PJ1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh15Q99PJ1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh15Q99PJ1 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdh15Q99PJ1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Gm17376-201ENSMUST00000166016 84 ntBASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Gm5161-201ENSMUST00000075243 853 ntBASIC16■□□□□ 0.15
Pcdh15Q99PJ1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Gm10040-201ENSMUST00000080726 1662 ntBASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Gm12997-201ENSMUST00000120207 640 ntBASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Gm25927-201ENSMUST00000175058 117 ntBASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 CT030704.2-201ENSMUST00000228887 494 ntBASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh15Q99PJ1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Gm13369-201ENSMUST00000119442 987 ntBASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Gm13123-201ENSMUST00000122173 492 ntBASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Gm18753-201ENSMUST00000201000 566 ntBASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh15Q99PJ1 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms