Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Gtf2ird2Q99NI3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gtf2ird2Q99NI3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Gtf2ird2Q99NI3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Gtf2ird2Q99NI3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gtf2ird2Q99NI3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gtf2ird2Q99NI3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gtf2ird2Q99NI3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
Gtf2ird2Q99NI3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Gm10576-201ENSMUST00000191927 825 ntBASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Gm37230-201ENSMUST00000194491 818 ntBASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gtf2ird2Q99NI3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Gm8410-201ENSMUST00000117225 605 ntBASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Auts2-212ENSMUST00000178555 309 ntBASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Gm25144-201ENSMUST00000179561 110 ntBASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Gm25352-201ENSMUST00000179815 110 ntBASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Gm18766-201ENSMUST00000189811 808 ntBASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Gtf2ird2Q99NI3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gtf2ird2Q99NI3 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms