Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raf1Q99N57 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raf1Q99N57 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Raf1Q99N57 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Raf1Q99N57 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13□□□□□ -0.33
Raf1Q99N57 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13□□□□□ -0.33
Raf1Q99N57 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Raf1Q99N57 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raf1Q99N57 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13□□□□□ -0.33
Raf1Q99N57 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raf1Q99N57 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13□□□□□ -0.33
Raf1Q99N57 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raf1Q99N57 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Raf1Q99N57 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raf1Q99N57 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13□□□□□ -0.33
Raf1Q99N57 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13□□□□□ -0.33
Raf1Q99N57 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13□□□□□ -0.33
Raf1Q99N57 AC151286.1-201ENSMUST00000198489 145 ntBASIC13□□□□□ -0.33
Raf1Q99N57 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13□□□□□ -0.33
Raf1Q99N57 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13□□□□□ -0.33
Raf1Q99N57 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raf1Q99N57 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raf1Q99N57 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Raf1Q99N57 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13□□□□□ -0.33
Raf1Q99N57 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Raf1Q99N57 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13□□□□□ -0.33
Raf1Q99N57 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Raf1Q99N57 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Raf1Q99N57 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13□□□□□ -0.33
Raf1Q99N57 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raf1Q99N57 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raf1Q99N57 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Raf1Q99N57 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raf1Q99N57 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Raf1Q99N57 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raf1Q99N57 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Raf1Q99N57 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raf1Q99N57 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raf1Q99N57 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.99□□□□□ -0.33
Raf1Q99N57 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.99□□□□□ -0.33
Raf1Q99N57 Mir3113-201ENSMUST00000175478 76 ntBASIC12.99□□□□□ -0.33
Raf1Q99N57 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Raf1Q99N57 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Raf1Q99N57 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raf1Q99N57 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raf1Q99N57 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Raf1Q99N57 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raf1Q99N57 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.99□□□□□ -0.33
Raf1Q99N57 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.99□□□□□ -0.33
Raf1Q99N57 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Raf1Q99N57 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Raf1Q99N57 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raf1Q99N57 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.98□□□□□ -0.33
Raf1Q99N57 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raf1Q99N57 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.98□□□□□ -0.33
Raf1Q99N57 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raf1Q99N57 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.98□□□□□ -0.33
Raf1Q99N57 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raf1Q99N57 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raf1Q99N57 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Raf1Q99N57 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Raf1Q99N57 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Raf1Q99N57 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Raf1Q99N57 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.98□□□□□ -0.33
Raf1Q99N57 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raf1Q99N57 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raf1Q99N57 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Raf1Q99N57 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Raf1Q99N57 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.98□□□□□ -0.33
Raf1Q99N57 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Raf1Q99N57 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.98□□□□□ -0.33
Raf1Q99N57 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raf1Q99N57 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raf1Q99N57 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raf1Q99N57 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raf1Q99N57 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raf1Q99N57 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raf1Q99N57 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Raf1Q99N57 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raf1Q99N57 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Raf1Q99N57 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Raf1Q99N57 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raf1Q99N57 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Raf1Q99N57 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raf1Q99N57 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raf1Q99N57 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Raf1Q99N57 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Raf1Q99N57 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Raf1Q99N57 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Raf1Q99N57 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.97□□□□□ -0.33
Raf1Q99N57 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Raf1Q99N57 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Raf1Q99N57 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Raf1Q99N57 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Raf1Q99N57 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Raf1Q99N57 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Raf1Q99N57 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Raf1Q99N57 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.97□□□□□ -0.33
Raf1Q99N57 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.97□□□□□ -0.33
Raf1Q99N57 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms