Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx6-1Q99MA9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.52□□□□□ -0.24
Nkx6-1Q99MA9 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx6-1Q99MA9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx6-1Q99MA9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx6-1Q99MA9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx6-1Q99MA9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.52□□□□□ -0.24
Nkx6-1Q99MA9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx6-1Q99MA9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.52□□□□□ -0.24
Nkx6-1Q99MA9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx6-1Q99MA9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.52□□□□□ -0.24
Nkx6-1Q99MA9 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Gm27839-201ENSMUST00000184242 106 ntBASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx6-1Q99MA9 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Gm15460-201ENSMUST00000118147 391 ntBASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Gm37230-201ENSMUST00000194491 818 ntBASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nkx6-1Q99MA9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Gm12390-201ENSMUST00000117897 397 ntBASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.5□□□□□ -0.25
Nkx6-1Q99MA9 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms