Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Gm45453-201ENSMUST00000211758 853 ntBASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cstf1Q99LC2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Mir1982-201ENSMUST00000157368 74 ntBASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.42□□□□□ -0.1
Cstf1Q99LC2 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cstf1Q99LC2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.41□□□□□ -0.1
Cstf1Q99LC2 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.41□□□□□ -0.1
Cstf1Q99LC2 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms