Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.17□□□□□ -0.3
Lims1Q99JW4 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.17□□□□□ -0.3
Lims1Q99JW4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.17□□□□□ -0.3
Lims1Q99JW4 Gm10154-201ENSMUST00000084445 354 ntBASIC13.17□□□□□ -0.3
Lims1Q99JW4 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lims1Q99JW4 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.16□□□□□ -0.3
Lims1Q99JW4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.16□□□□□ -0.3
Lims1Q99JW4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Lims1Q99JW4 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.16□□□□□ -0.3
Lims1Q99JW4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lims1Q99JW4 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.16□□□□□ -0.3
Lims1Q99JW4 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Lims1Q99JW4 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Gm10275-202ENSMUST00000168697 495 ntBASIC13.16□□□□□ -0.3
Lims1Q99JW4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Gm45098-201ENSMUST00000207179 657 ntBASIC13.16□□□□□ -0.3
Lims1Q99JW4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Gm10275-201ENSMUST00000092620 635 ntBASIC13.16□□□□□ -0.3
Lims1Q99JW4 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lims1Q99JW4 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.15□□□□□ -0.3
Lims1Q99JW4 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lims1Q99JW4 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.15□□□□□ -0.3
Lims1Q99JW4 Gm12350-201ENSMUST00000121208 462 ntBASIC13.15□□□□□ -0.3
Lims1Q99JW4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Gm2651-201ENSMUST00000203560 838 ntBASIC13.15□□□□□ -0.3
Lims1Q99JW4 Gm44487-201ENSMUST00000205145 325 ntBASIC13.15□□□□□ -0.3
Lims1Q99JW4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lims1Q99JW4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lims1Q99JW4 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.14□□□□□ -0.31
Lims1Q99JW4 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lims1Q99JW4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Lims1Q99JW4 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lims1Q99JW4 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
Lims1Q99JW4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms