Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk9Q99J95 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk9Q99J95 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk9Q99J95 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk9Q99J95 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cdk9Q99J95 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk9Q99J95 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk9Q99J95 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Cdk9Q99J95 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cdk9Q99J95 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk9Q99J95 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk9Q99J95 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cdk9Q99J95 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk9Q99J95 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk9Q99J95 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk9Q99J95 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk9Q99J95 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk9Q99J95 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk9Q99J95 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk9Q99J95 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.57□□□□□ -0.08
Cdk9Q99J95 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk9Q99J95 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk9Q99J95 Gm8097-201ENSMUST00000117903 829 ntBASIC14.57□□□□□ -0.08
Cdk9Q99J95 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk9Q99J95 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Cdk9Q99J95 Gm27459-201ENSMUST00000184860 107 ntBASIC14.57□□□□□ -0.08
Cdk9Q99J95 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk9Q99J95 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk9Q99J95 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk9Q99J95 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk9Q99J95 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cdk9Q99J95 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk9Q99J95 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk9Q99J95 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk9Q99J95 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk9Q99J95 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk9Q99J95 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk9Q99J95 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk9Q99J95 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk9Q99J95 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk9Q99J95 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk9Q99J95 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk9Q99J95 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.56□□□□□ -0.08
Cdk9Q99J95 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk9Q99J95 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk9Q99J95 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk9Q99J95 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk9Q99J95 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk9Q99J95 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk9Q99J95 Gm12644-201ENSMUST00000119935 606 ntBASIC14.56□□□□□ -0.08
Cdk9Q99J95 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.56□□□□□ -0.08
Cdk9Q99J95 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk9Q99J95 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.56□□□□□ -0.08
Cdk9Q99J95 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk9Q99J95 Gm43347-201ENSMUST00000200226 580 ntBASIC14.56□□□□□ -0.08
Cdk9Q99J95 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.56□□□□□ -0.08
Cdk9Q99J95 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.56□□□□□ -0.08
Cdk9Q99J95 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk9Q99J95 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk9Q99J95 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk9Q99J95 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk9Q99J95 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk9Q99J95 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Cdk9Q99J95 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Cdk9Q99J95 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk9Q99J95 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.55□□□□□ -0.08
Cdk9Q99J95 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk9Q99J95 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms