Protein–RNA interactions for Protein: Q99J19

Smim11a, Small integral membrane protein 11A, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim11aQ99J19 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smim11aQ99J19 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim11aQ99J19 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
Smim11aQ99J19 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim11aQ99J19 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smim11aQ99J19 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smim11aQ99J19 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim11aQ99J19 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim11aQ99J19 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.18□□□□□ -0.14
Smim11aQ99J19 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.18□□□□□ -0.14
Smim11aQ99J19 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.18□□□□□ -0.14
Smim11aQ99J19 Gm21362-201ENSMUST00000194272 928 ntBASIC14.18□□□□□ -0.14
Smim11aQ99J19 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.18□□□□□ -0.14
Smim11aQ99J19 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.18□□□□□ -0.14
Smim11aQ99J19 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.17□□□□□ -0.14
Smim11aQ99J19 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Gm7977-201ENSMUST00000193787 748 ntBASIC14.17□□□□□ -0.14
Smim11aQ99J19 Gm2272-201ENSMUST00000194903 582 ntBASIC14.17□□□□□ -0.14
Smim11aQ99J19 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Gm10060-201ENSMUST00000212002 111 ntBASIC14.17□□□□□ -0.14
Smim11aQ99J19 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smim11aQ99J19 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Gm13036-201ENSMUST00000117799 748 ntBASIC14.16□□□□□ -0.14
Smim11aQ99J19 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.16□□□□□ -0.14
Smim11aQ99J19 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smim11aQ99J19 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.16□□□□□ -0.14
Smim11aQ99J19 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Smim11aQ99J19 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim11aQ99J19 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smim11aQ99J19 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.15□□□□□ -0.14
Smim11aQ99J19 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim11aQ99J19 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms