Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC17.02■□□□□ 0.32
Col20a1Q923P0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC17.02■□□□□ 0.32
Col20a1Q923P0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col20a1Q923P0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Col20a1Q923P0 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col20a1Q923P0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col20a1Q923P0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col20a1Q923P0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col20a1Q923P0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col20a1Q923P0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Col20a1Q923P0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Col20a1Q923P0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col20a1Q923P0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col20a1Q923P0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col20a1Q923P0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col20a1Q923P0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col20a1Q923P0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col20a1Q923P0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col20a1Q923P0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Gm15460-201ENSMUST00000118147 391 ntBASIC17.01■□□□□ 0.31
Col20a1Q923P0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Col20a1Q923P0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.01■□□□□ 0.31
Col20a1Q923P0 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.01■□□□□ 0.31
Col20a1Q923P0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.01■□□□□ 0.31
Col20a1Q923P0 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.01■□□□□ 0.31
Col20a1Q923P0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.01■□□□□ 0.31
Col20a1Q923P0 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.01■□□□□ 0.31
Col20a1Q923P0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col20a1Q923P0 Gm15393-201ENSMUST00000120499 219 ntBASIC17■□□□□ 0.31
Col20a1Q923P0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17■□□□□ 0.31
Col20a1Q923P0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col20a1Q923P0 Gm6218-201ENSMUST00000219812 628 ntBASIC17■□□□□ 0.31
Col20a1Q923P0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col20a1Q923P0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col20a1Q923P0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Col20a1Q923P0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col20a1Q923P0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col20a1Q923P0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Col20a1Q923P0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Col20a1Q923P0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col20a1Q923P0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col20a1Q923P0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17■□□□□ 0.31
Col20a1Q923P0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17■□□□□ 0.31
Col20a1Q923P0 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col20a1Q923P0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col20a1Q923P0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col20a1Q923P0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col20a1Q923P0 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.99■□□□□ 0.31
Col20a1Q923P0 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col20a1Q923P0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Col20a1Q923P0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col20a1Q923P0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Col20a1Q923P0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col20a1Q923P0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col20a1Q923P0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col20a1Q923P0 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.99■□□□□ 0.31
Col20a1Q923P0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col20a1Q923P0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Col20a1Q923P0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col20a1Q923P0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Col20a1Q923P0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Col20a1Q923P0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col20a1Q923P0 Carlr-201ENSMUST00000181515 2574 ntBASIC16.99■□□□□ 0.31
Col20a1Q923P0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col20a1Q923P0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col20a1Q923P0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Gm21854-201ENSMUST00000179901 471 ntBASIC16.98■□□□□ 0.31
Col20a1Q923P0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.98■□□□□ 0.31
Col20a1Q923P0 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.98■□□□□ 0.31
Col20a1Q923P0 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.98■□□□□ 0.31
Col20a1Q923P0 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.98■□□□□ 0.31
Col20a1Q923P0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms