Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Gm2810-201ENSMUST00000118681 990 ntBASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha3Q91Y16 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Gm27920-201ENSMUST00000183953 96 ntBASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Gm2451-201ENSMUST00000199447 999 ntBASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Gm10290-201ENSMUST00000200451 999 ntBASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Olfr286-202ENSMUST00000205305 969 ntBASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha3Q91Y16 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Gm15483-201ENSMUST00000120338 456 ntBASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms