Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Gm18766-201ENSMUST00000189811 808 ntBASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha9Q91Y11 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha9Q91Y11 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Gm15693-201ENSMUST00000120470 637 ntBASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Gm5779-201ENSMUST00000218467 910 ntBASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdha9Q91Y11 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Gm5566-201ENSMUST00000116118 459 ntBASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms