Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Gm27741-201ENSMUST00000185060 237 ntBASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb4Q91XZ6 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms