Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx1Q91V10 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx1Q91V10 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Vsx1Q91V10 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx1Q91V10 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Vsx1Q91V10 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Vsx1Q91V10 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx1Q91V10 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Vsx1Q91V10 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.28□□□□□ -0.12
Vsx1Q91V10 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.28□□□□□ -0.12
Vsx1Q91V10 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx1Q91V10 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx1Q91V10 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx1Q91V10 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vsx1Q91V10 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vsx1Q91V10 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vsx1Q91V10 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vsx1Q91V10 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vsx1Q91V10 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vsx1Q91V10 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Vsx1Q91V10 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vsx1Q91V10 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vsx1Q91V10 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Vsx1Q91V10 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vsx1Q91V10 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vsx1Q91V10 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vsx1Q91V10 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vsx1Q91V10 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vsx1Q91V10 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Gm6222-201ENSMUST00000120787 396 ntBASIC14.27□□□□□ -0.13
Vsx1Q91V10 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
Vsx1Q91V10 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.27□□□□□ -0.13
Vsx1Q91V10 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.27□□□□□ -0.13
Vsx1Q91V10 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.27□□□□□ -0.13
Vsx1Q91V10 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.27□□□□□ -0.13
Vsx1Q91V10 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx1Q91V10 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Gm9002-201ENSMUST00000178437 499 ntBASIC14.26□□□□□ -0.13
Vsx1Q91V10 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.26□□□□□ -0.13
Vsx1Q91V10 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.26□□□□□ -0.13
Vsx1Q91V10 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.26□□□□□ -0.13
Vsx1Q91V10 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms