Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.85■□□□□ 0.29
StrcQ8VIM6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
StrcQ8VIM6 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
StrcQ8VIM6 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
StrcQ8VIM6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
StrcQ8VIM6 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC16.84■□□□□ 0.29
StrcQ8VIM6 Gm15770-201ENSMUST00000117498 584 ntBASIC16.84■□□□□ 0.29
StrcQ8VIM6 Gm11618-201ENSMUST00000117946 267 ntBASIC16.84■□□□□ 0.29
StrcQ8VIM6 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
StrcQ8VIM6 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC16.84■□□□□ 0.29
StrcQ8VIM6 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
StrcQ8VIM6 Gm16570-201ENSMUST00000161951 436 ntBASIC16.84■□□□□ 0.29
StrcQ8VIM6 Gm17376-201ENSMUST00000166016 84 ntBASIC16.84■□□□□ 0.29
StrcQ8VIM6 Gm42627-201ENSMUST00000197347 224 ntBASIC16.84■□□□□ 0.29
StrcQ8VIM6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
StrcQ8VIM6 AC093022.1-201ENSMUST00000226949 1072 ntBASIC16.84■□□□□ 0.29
StrcQ8VIM6 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
StrcQ8VIM6 Gm10146-201ENSMUST00000072739 309 ntBASIC16.84■□□□□ 0.29
StrcQ8VIM6 Gm5161-201ENSMUST00000075243 853 ntBASIC16.84■□□□□ 0.29
StrcQ8VIM6 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
StrcQ8VIM6 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC16.84■□□□□ 0.29
StrcQ8VIM6 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.84■□□□□ 0.29
StrcQ8VIM6 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
StrcQ8VIM6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
StrcQ8VIM6 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
StrcQ8VIM6 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
StrcQ8VIM6 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
StrcQ8VIM6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
StrcQ8VIM6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
StrcQ8VIM6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
StrcQ8VIM6 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC16.84■□□□□ 0.29
StrcQ8VIM6 Gm37922-201ENSMUST00000195596 455 ntBASIC16.84■□□□□ 0.29
StrcQ8VIM6 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
StrcQ8VIM6 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
StrcQ8VIM6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
StrcQ8VIM6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
StrcQ8VIM6 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
StrcQ8VIM6 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
StrcQ8VIM6 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
StrcQ8VIM6 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
StrcQ8VIM6 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.83■□□□□ 0.28
StrcQ8VIM6 Gm13369-201ENSMUST00000119442 987 ntBASIC16.83■□□□□ 0.28
StrcQ8VIM6 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.83■□□□□ 0.28
StrcQ8VIM6 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.83■□□□□ 0.28
StrcQ8VIM6 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.83■□□□□ 0.28
StrcQ8VIM6 Gm12403-201ENSMUST00000121384 959 ntBASIC16.83■□□□□ 0.28
StrcQ8VIM6 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.83■□□□□ 0.28
StrcQ8VIM6 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.83■□□□□ 0.28
StrcQ8VIM6 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.83■□□□□ 0.28
StrcQ8VIM6 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.83■□□□□ 0.28
StrcQ8VIM6 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC16.83■□□□□ 0.28
StrcQ8VIM6 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
StrcQ8VIM6 AC132384.14-201ENSMUST00000219346 1147 ntBASIC16.83■□□□□ 0.28
StrcQ8VIM6 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
StrcQ8VIM6 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC16.83■□□□□ 0.28
StrcQ8VIM6 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
StrcQ8VIM6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
StrcQ8VIM6 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
StrcQ8VIM6 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
StrcQ8VIM6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
StrcQ8VIM6 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
StrcQ8VIM6 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.82■□□□□ 0.28
StrcQ8VIM6 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
StrcQ8VIM6 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Itm2b-204ENSMUST00000228637 783 ntBASIC16.82■□□□□ 0.28
StrcQ8VIM6 n-R5s195-201ENSMUST00000082891 119 ntBASIC16.82■□□□□ 0.28
StrcQ8VIM6 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
StrcQ8VIM6 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.82■□□□□ 0.28
StrcQ8VIM6 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Gm6222-202ENSMUST00000182143 629 ntBASIC16.82■□□□□ 0.28
StrcQ8VIM6 Gm9368-201ENSMUST00000219348 831 ntBASIC16.82■□□□□ 0.28
StrcQ8VIM6 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
StrcQ8VIM6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
StrcQ8VIM6 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms