Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Odf4Q8VI88 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.98□□□□□ -0.33
Odf4Q8VI88 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.98□□□□□ -0.33
Odf4Q8VI88 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.97□□□□□ -0.33
Odf4Q8VI88 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Gm14701-201ENSMUST00000117156 348 ntBASIC12.97□□□□□ -0.33
Odf4Q8VI88 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.97□□□□□ -0.33
Odf4Q8VI88 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Odf4Q8VI88 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Odf4Q8VI88 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms